Preheat oven to 350 degrees and grease a 9×13-inch or slightly smaller baking dish.: You will smell the warm oven air as it comes up to temperature, and a preheated oven ensures even baking and a properly crisped topping. Greasing the dish prevents sticking and helps the edges brown evenly. If the oven temperature is too low you may end up with a soggy top, so allow the oven to fully reach 350 degrees before inserting the casserole.
Cook pasta according to package directions in salted water. Rinse pasta under cold water. Drain well.: When the water comes to a rolling boil, you should hear a lively, bubbling sound, and the pasta will become slightly translucent at the edges when it is al dente. Salting the water seasons the shells from within, so they do not taste flat. Rinsing in cold water stops further cooking so the shells hold their shape in the bake. A common mistake is overcooking the pasta, which leads to a mushy texture once baked.
While pasta is cooking, bring heavy cream, butter, onion, garlic powder, pepper, nutmeg, and crushed red pepper flakes to a simmer in a medium saucepan. Simmer for 3 to 5 minutes to thicken some. Be sure to stir frequently.: As the cream warms you will notice steam and a faint dairy aroma, and the butter will melt into a glossy pool. The diced onion will soften and give off a mild sweet scent, signaling that flavors are marrying. Stir frequently to prevent scorching, and maintain a gentle simmer rather than a vigorous boil to keep the cream smooth. If the heat is too high you risk scorching the cream and creating off flavors.
Stir in the lemon juice and 2 cups of Parmesan. Stir until the parmesan is melted. Remove from heat and stir in the crab.: During this brief simmer the sauce will reduce and thicken, coating the back of a spoon with a velvety texture. You may hear a soft bubbling and smell the warming spices like nutmeg . Stirring keeps the sauce homogeneous and helps the diced onion soften evenly. If you skip stirring, the cream can cling and burn on the pan bottom, leading to a grainy sauce.
In a large bowl, stir together the pasta, parsley, and crab mixture. Transfer to prepared baking dish.: When you add the grated Parmesan cheese it will melt into the warm cream, releasing a savory, nutty fragrance and creating a glossy sauce. The splash of lemon juice lifts the flavor, adding a bright citrus snap. Fold in the lump crab meat gently so the flakes remain intact and visible in the sauce. If the sauce sits too long on high heat after adding cheese, it can become grainy, so remove it from heat to preserve creaminess.
Combine the remaining 1/2 cup parmesan cheese and the panko crumbs. Sprinkle over the shells.: Combine the drained shells with the sauce and chopped parsley , tossing until each shell is coated; you should see glossy sauce clinging in the shell crevices. The parsley adds fresh green flecks and herbaceous notes. Transfer evenly into the greased dish so the heat distributes uniformly during baking. Overfilling the pan can result in uneven cooking, so leave a little room at the top.
Bake for 15 minutes and then broil for a few minutes to brown the panko crumbs.: The combination of Parmesan cheese and panko crumbs creates the toasty, golden topping that provides pleasing contrast. The dry crumbs will turn fragrant and golden under high heat, offering a crunchy bite. Distribute the mixture evenly for uniform browning. If you pile the crumbs too thickly they may brown on top but remain soft underneath.
Bake for 15 minutes and then broil for a few minutes to brown the panko crumbs: In the oven you will notice bubbling at the edges and the aroma of toasted cheese and crumbs as the casserole heats through. The 15 minute bake warms everything and helps flavors meld, while the brief broil caramelizes the topping to a crisp, golden color. Watch closely during broiling since the crumbs can brown rapidly, and remove as soon as they reach your preferred color to avoid burning.